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1.
Inferring ligand-receptor cellular networks from bulk and spatial transcriptomic datasets with BulkSignalR.
Nucleic Acids Res
; 2023 May 05.
Article
in English
| MEDLINE | ID: mdl-37144485
2.
A cell-to-patient machine learning transfer approach uncovers novel basal-like breast cancer prognostic markers amongst alternative splice variants.
BMC Biol
; 19(1): 70, 2021 04 12.
Article
in English
| MEDLINE | ID: mdl-33845831
3.
Endothelial, epithelial, and fibroblast cells exhibit specific splicing programs independently of their tissue of origin.
Genome Res
; 24(3): 511-21, 2014 Mar.
Article
in English
| MEDLINE | ID: mdl-24307554
4.
Mini-Exome Coupled to Read-Depth Based Copy Number Variation Analysis in Patients with Inherited Ataxias.
Hum Mutat
; 37(12): 1340-1353, 2016 12.
Article
in English
| MEDLINE | ID: mdl-27528516
5.
iMOKA: k-mer based software to analyze large collections of sequencing data.
Genome Biol
; 21(1): 261, 2020 10 13.
Article
in English
| MEDLINE | ID: mdl-33050927
6.
GECKO is a genetic algorithm to classify and explore high throughput sequencing data.
Commun Biol
; 2: 222, 2019.
Article
in English
| MEDLINE | ID: mdl-31240260
7.
Splicing switch of an epigenetic regulator by RNA helicases promotes tumor-cell invasiveness.
Nat Struct Mol Biol
; 19(11): 1139-46, 2012 Nov.
Article
in English
| MEDLINE | ID: mdl-23022728
8.
Real-time imaging of cotranscriptional splicing reveals a kinetic model that reduces noise: implications for alternative splicing regulation.
J Cell Biol
; 193(5): 819-29, 2011 May 30.
Article
in English
| MEDLINE | ID: mdl-21624952
9.
Misregulation of miR-1 processing is associated with heart defects in myotonic dystrophy.
Nat Struct Mol Biol
; 18(7): 840-5, 2011 Jun 19.
Article
in English
| MEDLINE | ID: mdl-21685920
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